Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804124.1_cds_XP_016487531.1_7795
CDS Infomation

[gene=LOC107807619] [db_xref=GeneID:107807619] [protein=probable protein phosphatase 2C 40] [protein_id=XP_016487531.1] [location=join(31078..32211,32772..33036,34412..34539)] [gbkey=CDS]
Sequence

ATGATGTATGGGCAAACAATAGCTGACTCAGGAGGAGAAATCAAAATAAGTTTTGGCTAT
CACTGCACAGATGATTCGGGTGACGAATCAGTCAGTATTCACAACTGCCATGGAATTAAA
CTTCAAAGAGCCAACAATTCCTTCTCTTGCCTGTCTGGGGCCGCTTTAAGTGCCAATGCC
ACACTAGCTAACACAAATATTTGCAATGGCTTGTTTGAAGCTGAGATACTTCCAGCCTTG
GATTCACCTACTTCTTTCCGTCGGATTCCCTCTTCCCCGTCTTTCTCAAGGTTGGATTTA
TTGTCATCTTCTTTCCAGAGCAATTTGTCAATCTTAAGTGGTAGTCCGTCCTCTCCAAGT
GAGCTACCTGAAGACGATTTATTTTCATTGAGGTCAATGAGTGCTCCTCCCAGAAGTGAA
GGTTTCCTTAATGCAACAGAAGTTAAAATTGCAGGCGGTGCAGCAGGTGAAGATAGAGTT
CAGGCTGTTTGTTCTGAAGAGAATGGGTCACTTTTCTGCGGCATATATGATGGCTTTAAT
GGAAGAGATGCAGCTGACTATCTGGCGGGTACATTATATGAAACAATTGGAAATCACCTC
AATTTATTGGATTGGGAAATGGGACAGGAGTCTGGTAAACTTTCTGACCGTTTGGGTTTA
TGTGGAAGCCTCCACGACGCCATTCAAGATGGCAAATCTAGCATTAATCAGGGATTATAT
GTTGACCGCTTTGCGGAAGTGGAAAAATCATGTGACTCATTTAAGCAGAAGGTACTTAAG
AGCCTCGAACAAGCTCTTTTTCAAGCTGAGAACGATTTCCTCCATATGGTTGAACAGGAA
ATGGATGACCGCCCGGACTTGGTATCCATTGGATGCTGTGTTTTAGCTGTGCTTCTCCTC
GGGAAAAACATGTATGTGCTCAACGTAGGTGATAGTCGAGCTGTATTGGCAACACAATGT
AACGATGAAGTGTTGCAGGCTGTGCAGCTGACCGCTTGCCATAGTGTTGATGATGAATCC
GAAAGAACTCGACTACTAAAGGATCACCCTGATGATCCCAAAACAATCGTGGCTGGGAAA
GTCAAGGGAAAGCTAAAGGTTACTCGGGCACTTGGAGTAGGTTATTTGAAAAAGAAATCA
ATGAATGATGCTTTGATGGGAATTCTTCGAGTCCGTAATCTGATCAGTCCACCATATGTT
TCTGTACAACCACATATGACTGTACACGAAATCTCGAGTTCAGATCAGTTTGTTGTGCTT
GGAAGTGATGGTTTATTTGACTTCTTCAGCAACGATGAGGTTGTTAAACTTGTCCATTCT
TATATCCTATGTCACCCTTCTGGTGATCCAGCCAAATTTCTAGTGGAGCAGCTCGTGATG
CGAGCAGCAGATTGTGCAGGATTTAGTAGGGAAGAGTTGATGAGCATACCAGCTGGTAGG
AGGAGGAAATATCATGATGATATAACAGCAATTGTAATAATTCTTGGAATGAACAAACGC
ACCTCAAAAGCATCTACATGCATATGA

Peptide Sequence

PEP ID

XP_016487531.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 40 [Nicotiana tabacum]
Sequence

MMYGQTIADSGGEIKISFGYHCTDDSGDESVSIHNCHGIKLQRANNSFSCLSGAALSANA
TLANTNICNGLFEAEILPALDSPTSFRRIPSSPSFSRLDLLSSSFQSNLSILSGSPSSPS
ELPEDDLFSLRSMSAPPRSEGFLNATEVKIAGGAAGEDRVQAVCSEENGSLFCGIYDGFN
GRDAADYLAGTLYETIGNHLNLLDWEMGQESGKLSDRLGLCGSLHDAIQDGKSSINQGLY
VDRFAEVEKSCDSFKQKVLKSLEQALFQAENDFLHMVEQEMDDRPDLVSIGCCVLAVLLL
GKNMYVLNVGDSRAVLATQCNDEVLQAVQLTACHSVDDESERTRLLKDHPDDPKTIVAGK
VKGKLKVTRALGVGYLKKKSMNDALMGILRVRNLISPPYVSVQPHMTVHEISSSDQFVVL
GSDGLFDFFSNDEVVKLVHSYILCHPSGDPAKFLVEQLVMRAADCAGFSREELMSIPAGR
RRKYHDDITAIVIILGMNKRTSKASTCI

Transcript Sequence

Gene sequence data has not been registered.